BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018F02SP1|AL427344
(667 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1806 1311 0.0
>3x_Contig1806
Length = 53694
Score = 1311 bits (660), Expect = 0.0
Identities = 664/666 (99%)
Strand = Plus / Plus
Query: 2 atcacacatgaaggcacatctcttcaagaattcttagtattttagtatttttaaatgaga 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4210 atcacacatgaaggcacatctcttcaagaattcttagtattttagtatttttaaatgaga 4269
Query: 62 atttgaattggcgatttcagttagatgaggaaaatgtgtcagcgggaacaatacaggatg 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4270 atttgaattggcgatttcagttagatgaggaaaatgtgtcagcgggaacaatacaggatg 4329
Query: 122 aaatagcctcaataggccttctacggaattgacaatacgctagttgatgggcattgaacc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4330 aaatagcctcaataggccttctacggaattgacaatacgctagttgatgggcattgaacc 4389
Query: 182 tgtaagataaccctagtaatttacagtgctaggctacagtgatgtattaaacatggaaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4390 tgtaagataaccctagtaatttacagtgctaggctacagtgatgtattaaacatggaaag 4449
Query: 242 aacaaaacccgcacaccacacactaaacacactcattctctttctattgccataaaataa 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4450 aacaaaacccgcacaccacacactaaacacactcattctctttctattgccataaaataa 4509
Query: 302 gttaaaagtggaaatcattccaaatagtttaagcatttatggacatacaaaccacaggga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4510 gttaaaagtggaaatcattccaaatagtttaagcatttatggacatacaaaccacaggga 4569
Query: 362 aataactttataacagacagtagagtaattcatagggtctaacacactgaatacagtaga 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4570 aataactttataacagacagtagagtaattcatagggtctaacacactgaatacagtaga 4629
Query: 422 cagtaactaaatcccaggtaaacataatactgtcataagaaccatatccaagaatgccaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4630 cagtaactaaatcccaggtaaacataatactgtcataagaaccatatccaagaatgccaa 4689
Query: 482 tgaatatcgttccaagtccagatttcaagtctgctgttgccaccgataagggttgcgagc 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4690 tgaatatcgttccaagtccagatttcaagtctgctgttgccaccgataagggttgcgagc 4749
Query: 542 accaatcgaatgcagtagcaagtttaccagatgtattccgtgaacaagtcggtgcccgcc 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4750 accaatcgaatgcagtagcaagtttaccagatgtattccgtgaacaagtcggtgcccgcc 4809
Query: 602 ctctgaacactcaacttaatgacagacatytattagagtcgcgtgtacgcaactgggacg 661
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 4810 ctctgaacactcaacttaatgacagacatccattagagtcgcgtgtacgcaactgggacg 4869
Query: 662 agaccc 667
||||||
Sbjct: 4870 agaccc 4875
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4163
Number of Sequences: 1807
Number of extensions: 4163
Number of successful extensions: 86
Number of sequences better than 1.0e-20: 1
length of query: 667
length of database: 10,358,551
effective HSP length: 16
effective length of query: 651
effective length of database: 10,329,639
effective search space: 6724594989
effective search space used: 6724594989
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)